YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85726451, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFPGVPVFSV CIALSVMIFC HAETLNLFGN LEAIYEQAEN ALSTLQESLL QLETNGTLNT  60
   61 SPDVIYPTSC LTSGDLENGL HTLKVPGLSP FQVYCENQLA GPGWIVIQKR FSGNLSFFRN 120
  121 WKEYKNGFGN LMDEYFLGLE KIRALTALEP HELYVHLEDF DDTIKHAKFD EFAIGNEDDD 180
  181 YAMNTLGKYS GTAGDSLRSH RKMKFSTYDR DNDHEFNKNC AFYYLGGWWY NACLDSNLNG 240
  241 QYMPGGKYEE SLFARGMCWR SWRGHNYGYR VTQMMIRPKC RMIPVTQR

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	288	0.99