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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60672631
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQWACVSAA NLSCQASIIN TQKLRNTPRC DAFSFKGSEF MAQSCRFLSP QAIYGRPRNG  60
   61 ACPLKVVCVD YPRPDLDNTA NFLEAAYFSS TFRASPRPAK PLKVVIAGAG LAGLATAKYL 120
  121 ADAGHKPILL EARDVLGGKV AAWKDKDGDW YETGLHILFG AYPNIQNLFG ELGIDDRLQW 180
  181 KEHSMIFAMP NKPGEFSRFD FPEVLPAPLN GIWAILKNNE MLTWPEKIKF AIGLLPAILG 240
  241 GQAYVEAQDG LSVKDWMRKQ GIPDRVTTEV FIAMSKALNF INPDELSMQC ILIALNRFLQ 300
  301 EKHGSKMAFL DGSPPERLCA PIVDHIQSLG GEVRINSRIQ KIELNKDGTV KSFVLNNGSM 360
  361 IEADAYVFAT PVDILKLLLP DNWKEIPYFK KLEKLIGVPV INVHIWFDRK LKNTYDHLLF 420
  421 SRSPLLSVYA DMSVTCKEYY NPNQSMLELV FAPAEEWISC SDSEIIDATL KELAKLFPDE 480
  481 IAADQSKAKI LKYHVVKTPR SVYKTVPDCE PCRPLQRSPL EGFYLAGDYT KQKYLASMEG 540
  541 AVLSGKLCAQ AIVQDYELLV ARGQTRLAEA SVR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle