YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37930463
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCTRILFFS RTIRFAAPLS SSSLHSFVFS NSPITLSRSY HSSLLTTTSF PIKSLVSTST  60
   61 TPFSFTLRPD HTMAAPTSVY DFTVKDARGN DVNLGDYKGK VLLIVNVASQ CGLTNSNYTE 120
  121 LSQLYEKYKS KGLEILGFPC NQFGAQEPGD NEQIQEFVCT RFKAEFPVFD KVDVNGDSAA 180
  181 PLYKYLKSSK GGLFGDKIKW NFSKFLVDKE GNVVERYAPT TSPLSIEKDL VKLLGA

Type	Start	End	Confidence
Signal Peptide	1	30	0.78
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	236	0.99