YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MIAA_SALPC
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDVSKASLP KAIFLMGPTA SGKTALAIAL RKVLPVELIS VDSALIYRGM DIGTAKPNAD  60
   61 ELKAAPHRLL DIRDPSQAYS AADFRRDALA QMAEITAAGR IPLLVGGTML YFKALLEGLS 120
  121 PLPSADPEVR SRIEQQAAEL GWEALHQQLQ EIDPVAAARI HPNDPQRLSR ALEVFFISGK 180
  181 TLTELTQTSG DALPYQVHQF AIAPASRELL HQRIELRFHQ MLASGFEAEV RALFARGDLH 240
  241 TDLPSIRCVG YRQMWSYIEG EISYDEMVYR GVCATRQLAK RQMTWLRGWE GVRWLDSENP 300
  301 DRARKEVLQV VGAIAD

Type	Start	End	Confidence
Signal Peptide	1	27	0.59
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	316	0.98