YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62130416, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFSMRAIKA RGTRRANKRL ASCPARRFSS ASICKRCSSS SGLVTTSASC ANQSSRNGVF  60
   61 RVTICAILWL SYQLTISEGL MATYYSNDFR SGLKIMLDGE PYAVESSEFV KPGKGQAFAR 120
  121 VKLRRLLTGT RVEKTFKSTD SAEGADVVDM NLTYLYNDGE FWHFMNNETF EQLSADAKAI 180
  181 GDNAKWLLDQ AECIVTLWNG QPISVTPPNF VELEIVDTDP GLKGDTAGTG GKPATLSTGA 240
  241 VVKVPLFVQI GEVIKVDTRS GEYVSRVK

Type	Start	End	Confidence
Signal Peptide	1	50	0.98
N-region	1	41
H-region	42	47
C-region	48	50
Cleavage Site	50	51
Non-Cytoplasmic	51	268	0.99