YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|198242643, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANNTTGFTR IIKAAGYSWK GFRAAWTHEA AFRQESIAVL LGVIIACWLD VDAITRVLLI  60
   61 GSVLLIMIVE ILNSAIEAVV DRIGSEYHEL SGRAKDMGSA AVLLSIFVAL MTWGILLWSH 120
  121 FR

Type	Start	End	Confidence
Cytoplasmic	1	29	0.82
Transmembrane Helix	30	49	0.77
Non-Cytoplasmic	50	56	0.49
Transmembrane Helix	57	76	0.86
Cytoplasmic	77	96	0.62
Transmembrane Helix	97	118	0.91
Non-Cytoplasmic	119	122	0.53