YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62130306, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKRTISALA LAFIASSAFA SGTVTVFTQG NSEPKTLTDA ERLLDLVGQP RLATSWWPAA  60
   61 VIGEEQTTVT ARQQQQELLG RLAALSAEED GDAAGAINTL RRQIQAVKVT GRQFVNLDPD 120
  121 VVRVSERGNP PLQGHYTLWV GPQPTQVTLF GLISQPGSQP FVPGRDVASY LEDQRLLSGA 180
  181 DRSYAWVVYP DGRSQKAPVA YWNKRHIEPM PGSIIFVGFA DSLWRGTPEA MNADILHTLT 240
  241 QRIPE

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	245	0.99