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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62182388, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFSRLPEKA AWSSLGLAFC YNPSPVRRLS TIPMRLNPGQ QHAVEFVTGP CLVLAGAGSG  60
   61 KTRVITNKIA HLIRGCGYQA RHIAAVTFTN KAAREMKERV GQTLGRKEAR GLMISTFHTL 120
  121 GLDIIKREYA ALGMKSNFSL FDDSDQVALL KELTEGLIED DKVLLQQLIS TISNWKNDLK 180
  181 TPAQAAAGAK GERDRIFAHC YGLYDAHMKA CNVLDFDDLI LLPTLLLQRN DEVRERWQNK 240
  241 IRYLLVDEYQ DTNTSQYELV KLLVGQRARF TVVGDDDQSI YSWRGARPQN LVLLSQDFPA 300
  301 LQVIKLEQNY RSSGRILKAA NILIANNPHV FEKRLFSELG YGAELKVLSA NNEEHEAERV 360
  361 TGELIAHHFV NKTQYKDYAI LYRGNHQSRV FEKFLMQNRI PYKISGGTSF FSRPEIKDLL 420
  421 AYLRVLTNPD DDSAFLRIVN TPKREIGPAT LQKLGEWAMT RNKSLFTASF DMGLSQKLTG 480
  481 RGYDSLTRFT HWLGEIQRLA EREPVAAVRD LIHGIDYESW LYETSPSPKA AEMRMKNVNQ 540
  541 LFSWMTEMLE GNELDEPMTL TQVVTRFTLR DMMERGESEE ELDQVQLMTL HASKGLEFPY 600
  601 VYMVGMEEGF LPHQSSIDED NIEEERRLAY VGITRAQKEL TFTLCKERRQ YGELVRPEPS 660
  661 RFLLELPQDD LIWEQERKVV SAEERMQKGQ SHLANLKAMM AAKRAKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle