YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62182085, gi|...
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSLTLVPVP PVAQLEGVSQ HYGKTVALNN ITLDIPARSM VGLIGPDGVG KSSLLSLISG  60
   61 ARVIEQGNVI VLGGDMRDAK HRRDVCPRIA WMPQGLGKNL YHTLSVYENV DFFARLFGHD 120
  121 KAEREARITE LLNSTGLAPF RDRPAGKLSG GMKQKLGLCC ALIHDPELLI LDEPTTGVDP 180
  181 LSRAQFWDLI DSIRQRQTNM SVLVATAYME EAERFDWLVA MNAGEILATG SAQQLRAKTH 240
  241 SATLEQAFIA LLPEAQRQAH KPVVIPPYHA EQEEIAIEAK DLTMRFGKFV AVDHVNFRIP 300
  301 RGEIFGFLGS NGCGKSTTMK MLTGLLPASE GQAWLFGQPV DPNDIDTRRR VGYMSQAFSL 360
  361 YNELTVRQNL ELHARLFHIP PAEIPARVAQ MIERFMLTEV EDTLPASLPL GIRQRLSLAV 420
  421 AVIHRPEMLI LDEPTSGVDP VARDMFWQLM VDLSRQDKVT IFISTHFMNE AERCDRMSLM 480
  481 HAGKVLASGT PQELVQQRGA ANLEAAFISW LQEAAGAAPE TPIPPSQTPA ASGKPSRQGL 540
  541 SFRRLFSYSR REALELRRDP VRSTLALLGT VILMLIMGYG ISMDVENLRF AVLDRDQTVS 600
  601 SQAWSLNLAG SRYFIEQPPL ASYDELDRRM RSGELAVAIE IPPNFGRDIA RGTPAQIGVW 660
  661 VDGAMPSRAE TVKGYVQAMH QSWLQEAASR QPNPVKQVGL LNIETRYRYN PDVKSLPAIV 720
  721 PAVIPLLLMM IPSMLSALSV VREKELGSMI NLYVTPTTRS EFLLGKQLPY IELGMLNFLL 780
  781 LCALSVFVFG VPLKGSFLTL TLAALLYVII ATGLGLLIST FMKSQIAAIF GTSIITLIPA 840
  841 TQFSGMIDPV ASLEGPGRWI GEIYPTSHFL TIARGTFSKA LDLSDLWPLF MPLLIAVPVV 900
  901 MGLSILLLKK QEG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle