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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62129469, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQIRMLAQY YVDLMMKLGL VRFSMLLALA LVVLAIVVQM AVTMVLHGQV ESIDVIRSIF  60
   61 FGLLITPWAV YFLSVVVEQL EESRQRLSRL VQKLEEMRER DLKLNVQLKD NIAQLNQEIV 120
  121 DREKAEAELQ ETFEQLKVEI KEREEAQIQL EQQSSFLRSF LDASPDLVFY RNEDKEFSGC 180
  181 NRAMELLTGK SEKQLVHLKP EDVYSPEAAE KVIETDEKVF RHNVSLTYEQ WLDYPDGRKA 240
  241 CFEIRKVPYY DRVGKRHGLM GFGRDITERK RYQDALERAS RDKTTFISTI SHELRTPLNG 300
  301 IVGLSRILLD TNLTAEQEKY LKTIHVSAVT LGNIFNDIID MDKMERRKVQ LDNQPVDFTS 360
  361 FMADLENLSG LQAQQKGLRF VLEPTLPLPH KVITDGTRLR QILWNLISNA VKFTQQGQVT 420
  421 VRARYDEGDM LHFEVEDSGI GIPQDEQDKI FAMYYQVKDS HGGKPATGTG IGLAVSRRLA 480
  481 KNMGGDITVS SLPGKGSTFT LTVHAPAVAE EVEDAFDEDD MPLPALHVLL VEDIELNVIV 540
  541 ARSVLEKLGN SVDVAMTGKA ALEMFAPGEY DLVLLDIQLP DMTGLDIARE LTRRHTREDL 600
  601 PPLVALTANV LKDKKEYLDA GMDDVLSKPL SVPALTAMIK KFWDATDKEE STVTPEESDK 660
  661 AQALLDIPML EQYIELVGPK LITDGLAVFE KMMPGYLSVL ESNLTARDKK GVVEEGHKIK 720
  721 GAAGSVGLRH LQQLGQQIQS PDLPAWEDNV AEWIEEMKQE WQHDVAVLKA WVANAEKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle