YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62181826, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLEPLMKF KTNKLSLNLM LAGSLLAASI PAFAVTGDTE QPIHIDSDQQ SLDMQGNVVT  60
   61 FTGNVVMTQG TIKINADKVV VTRPGGEQGK EVIDGYGNPA TFYQMQDNGK PVKGHASHMH 120
  121 YELAKDFVVL TGNAYLEQLD SNITGDKITY LVKEQKMQAF SEKGKRVTTV LVPSQLQDKN 180
  181 KGQTPAQKKS N

Type	Start	End	Confidence
Signal Peptide	1	34	0.99
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	191	0.99