YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62129095, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLRRKRISN PVRKRSMTML TRWKILVLLC GGFVTGTEAA GTKIVQLELH LVVTQPPPCT  60
   61 IGGASVEFGD VLTTKVGDAS QTKPVGYSLN CDGRASDYLK LQIQGTTTTI SGEQVLQTSV 120
  121 QGLGIRIQQA GNKQLVPVGI TDWLNFTLSG SNGPELEAVP VKEPTTQLAG GDFNASATLV 180
  181 VDYQ

Type	Start	End	Confidence
Signal Peptide	1	39	0.99
N-region	1	30
H-region	31	36
C-region	37	39
Cleavage Site	39	40
Non-Cytoplasmic	40	184	0.99