YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62128967, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYHTSPWLN LFNGSLMFKR RYVALLPLCV LLAACSSTPK SSGTQATTGT SSGGFLLEPQ  60
   61 HNVMQMGGDF ANNPNAQQFI DKMVSKHGFD RQQLQEILSQ SKRLDYVLRL MDRQAPTTQP 120
  121 PAGPNGAWLR YRKQFITPDN VQNGVAFWNQ YEDALNRAWQ VYGVPPEIIV GIIGVETRWG 180
  181 RIMGKTRILD ALATLSFNYP RRAEYFSGEL ETFLLMARDE QDDPLNLKGS FAGAMGYGQF 240
  241 MPSSYKEYAV DFNGDGHINL WDPVDAIGSV ANYFKAHGWV KGDTVAVPAN GQAPGLANGF 300
  301 KTKYSLSQLA AAGLTPQQSL GNHQEASLLR LDIGTGYQYW YGLPNFYTIT RYNHSTHYAM 360
  361 AVWQLGQAVA LARVR

Type	Start	End	Confidence
Signal Peptide	1	46	0.93
N-region	1	37
H-region	38	43
C-region	44	46
Cleavage Site	46	47
Non-Cytoplasmic	47	375	0.99