YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62128401, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYDESISSRA LNMSKSLNII WQYIRAFVLI YACLYAGIFL ASLLPITIPG SIIGMLILFV  60
   61 LLALQILPAK WVNPGCYVLI RYMALLFVPI GVGVMQYFDL LRAQFGPVVV SCAISTLVVF 120
  121 VVVSWSSHLI HGERKVVGQK GTKK

Type	Start	End	Confidence
Cytoplasmic	1	20	0.96
Transmembrane Helix	21	41	0.94
Non-Cytoplasmic	42	45	0.75
Transmembrane Helix	46	67	0.90
Cytoplasmic	68	77	0.80
Transmembrane Helix	78	98	0.94
Non-Cytoplasmic	99	104	0.83
Transmembrane Helix	105	126	0.92
Cytoplasmic	127	144	0.90