YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62128246, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARHHAFIL AGTGSGCGKT TVTLGLLRLL QKRALRVQPF KVGPDYLDTG WHTAICGVAS  60
   61 RNLDSFMLPP PVLNALFCEQ MRQADIAVIE GVMGLYDGYG VDPNYCSTAA MAKQLGCPVI 120
  121 LLVDGKAVST SLAAIVMGFQ HFDPTLNLAG VIVNRVTSDA HYQLLKNAIE HYCSLPVLGY 180
  181 VPPCDGVALP ERHLGLITAR ESLVNQQSWH DFAASLEQTV DVDALLSLSV LSALPTGMWP 240
  241 ERPDNTAGAG LTLALADDEA FNFYYPDNID LLERAGVNIV RFSPLHDRAL PDCQMIWLGG 300
  301 GYPELYAADL AANTAMLKHL RAAHQRGVAI YAECGGLMYL GSTLEDSGGE IHQMANIIPG 360
  361 HSKMGKRLTR FGYCEAQAMQ PTLLAVPGEI VRGHEFHYSD FIPETPAVMA CRKVRDGRVL 420
  421 QEWTGGWQTG NTFATYLHVH FAQRPEMLQH WLAAARRVL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle