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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62180496, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDGVAPFGN IHRYASTNGE SASSPPAPSP CILRRHRRCD TVIVNIVFRN NVFPFCKSKV  60
   61 ITAGADNVDN SLSGRCLMFN RIRVVTMLMM VLGVFALLQL VSGGLLFSSL QHNQQGFVIS 120
  121 NELRQQQSEL TSTWDLMLQT RINLSRSAAR MMMDASNQQS SAKTDLLQNA KTTLAQAAAH 180
  181 YANFKNMTPL PAMAEASANV DEKYQRYQAA LAELIQFLDN GNMDAYFAQP TQGMQNALGE 240
  241 ALGNYARVSE NLYRQTFDQS AHDYRFAQWQ LGGLAVVLVL ILMVVWFGIR HALLNPLARV 300
  301 ITHIREIASG DLTKTLTVSG RNEIGELAGT VEHMQRSLID TVTQVREGSD AIYSGTSEIA 360
  361 AGNTDLSSRT EQQASALEET AASMEQLTAT VKQNADNARQ ASQLAQSASE TARHGGKVVD 420
  421 GVVNTMHEIA DSSKKIADII SVIDGIAFQT NILALNAAVE AARAGEQGRG FAVVAGEVRN 480
  481 LASRSAQAAK EIKALIEDSV SRVDTGSVLV ESAGETMTDI VNAVTRVTDI MGEIASASDE 540
  541 QSRGIDQVAL AVSEMDRVTQ QNASLVQESA AAAAALEEQA SRLTQAVSAF RLASRPLAVN 600
  601 KPEMRLSVDA QSGNTPRPLA AGDDANWETF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle