YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62127330, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVMQKYALH AYPVMALMVA TLTGCAWIPA KPLVQGATTA QPIPGPVPVA NGSIFQSAQP  60
   61 INYGYQPLFE DRRPRNIGDT LTIVLQENVS ASKSSSANAS RDGKTSFGFD TVPRYLQGLF 120
  121 GNSRADMEAS GGNSFNGKGG ANASNTFSGT LTVTVDQVLA NGNLHVVGEK QIAINQGTEF 180
  181 IRFSGVVNPR TISGSNSVPS TQVADARIEY VGNGYINEAQ NMGWLQRFFL NLSPM

Type	Start	End	Confidence
Signal Peptide	1	29	0.49
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	235	0.93