YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62127085, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCPPSDRSV QKLSLSLRFG TMTMKKVLIA ALIAGFSLSA TAAQTIRFAT EASYPPFESM  60
   61 DANNKIVGFD VDLANALCKE IDASCTFTNQ AFDSLIPSLK FRRFDAVMAG MDITPEREKQ 120
  121 VLFTTPYYDN SALFVGQQGK YTSVDQLKGK KVGVQNGTTH QKFIMDKHQE ITTVPYDSYQ 180
  181 NAKLDLQNGR IDAVFGDTAV VTEWLKANPK LAPVGDKVTD KDYFGTGLGI AVRQGNTELQ 240
  241 QKFNTALEKV KKDGTYETIY NKWFQK

Type	Start	End	Confidence
Signal Peptide	1	42	0.99
N-region	1	33
H-region	34	39
C-region	40	42
Cleavage Site	42	43
Non-Cytoplasmic	43	266	0.99