YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56199562
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFSILIIAS ALAMTQAASF SDGLVPRFPV DGRIVGGVAA EIEELPYQVS LQKGGHFCGG  60
   61 SIISSKWILS AAHCVGNDSA PTLQIRVGSS FKSSGGDLMK VSQVVQHPAF NDDVIDFDYA 120
  121 LIELQDELEL SDVIKPVLLA DQDEEFEADT KCTVSGWGNT QKPAESTQQL RKVVVPIVSR 180
  181 EQCSKSYKGF NEITERMICA GFQKGGKDSC QGDSGGPLVH DDVLIGVVSW GKGCAEKNFP 240
  241 GVYANVAYVR DWIKGVTGV

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	259	0.99