YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|59808787
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RNAPLHSPPS EHYTIIFNTF VMMQLFNEIN ARKIHGERNV FDGIFSNPIF CTIVLGTFGI  60
   61 QIVIVQFGGK PFSCSPLSTE QWLWCLFVGV GELVWGQVIA TIPTSQLKCL KEAGHGPGKD 120
  121 EMTDEELAEG EEEIDHAERE LRRGQILWFR GLNRIQTQME VVSTFKRSGS FQGAVRRRSS 180
  181 VLSQLHDVTN LSTPTHVTLS AAKPTSAAGN PSGESIP

Type	Start	End	Confidence
Cytoplasmic	1	42	0.63
Transmembrane Helix	43	65	0.86
Non-Cytoplasmic	66	81	0.78
Transmembrane Helix	82	102	0.73
Cytoplasmic	103	217	0.70