YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|59862076, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACEASQDYQ IGEALLIGVV RQELMEVMEV TEGNAAPPAL PEAKPISNSQ DQILVQQLAN  60
   61 TIKVIGDKLD QDQAFNDMID GLVKVADKSS FWKLVEKVFT DGQINWGRII VLFYSVGKLS 120
  121 AKMVVARLPR IVSDILSLSL DYFKRNLLQW ILTVGGWMNS IPALACFSVD QFSGSSMRKY 180
  181 SPYVGVVFAF TGGLLLGGFI VSRFQKT

Type	Start	End	Confidence
Cytoplasmic	1	146	0.85
Transmembrane Helix	147	169	0.83
Non-Cytoplasmic	170	181	0.72
Transmembrane Helix	182	202	0.93
Cytoplasmic	203	207	0.70