YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58477162
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAVEESQAS GESQKVEEAS PPAVQQPTDP ASPTVATTPE PVGADAGDKN ATKAADDEPE  60
   61 YEVSSLFSSS LDQLSPGLPA ITGCFQNISS WIGFVTCFHG PLPSLRFPGL GSSSGRFQGG 120
  121 WHLGLLCIDF CSLGLQDGRG FGIGELVWGK LRGFSWWPGR IVSWWMTGRS RAAEGTRWVM 180
  181 WFGDGKFSVV SRAWWLGGRG RELGVLVLWP GFCWVPSGIQ AVKMHSACPP FSGRSHN

Type	Start	End	Confidence
Cytoplasmic	1	82	0.64
Transmembrane Helix	83	102	0.49
Non-Cytoplasmic	103	118	0.57
Transmembrane Helix	119	136	0.50
Cytoplasmic	137	202	0.43
Transmembrane Helix	203	222	0.60
Non-Cytoplasmic	223	237	0.55