YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|61097910, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSEECSITE NSSSHLERGQ RDHGTSVHFE KHREGSIQVP IPCAVLVVVL ITSLIIALFA  60
   61 LSVGKYNCPG FYENLESFDH HAASCKNEWF SYNGKCYFFS TTTKTWALAQ KSCSEDDATL 120
  121 AVIDSEKDMA FLKRYAGGLK HWIGLRNEAS QTWKWANGKE FNSWFNVTGS KKCVSLNHTD 180
  181 VASVDCEANL HWICSKASL

Type	Start	End	Confidence
Cytoplasmic	1	38	0.82
Transmembrane Helix	39	61	0.87
Non-Cytoplasmic	62	199	0.86