YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58476591, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMDKIRDSKY RSSETKRINV MLLSIVVAFA VCWLPLTIFN TVFDWNHQII ATCNHNLLFL  60
   61 LCHLTAMIST CVNPIFYGFL NKNFQRDLQF FFNFCDFRSR DDDYETIAMS TMHTDVSKTS 120
  121 LKQASPVAFK KISMNDNEKI

Type	Start	End	Confidence
Cytoplasmic	1	19	0.94
Transmembrane Helix	20	39	0.96
Non-Cytoplasmic	40	56	0.89
Transmembrane Helix	57	80	0.88
Cytoplasmic	81	140	0.98