YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|61697129
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRSRFFFVS IFLCLSQESS LELSKKLFGA NSPLTEHDED DHEHAQKRTR TWPAASSPEV  60
   61 DGDTCFIFSA MEGDPTKCWC PRGYIMCSEE DVRDVQSKLH QIKDLKRRNE VTPSWMKRLC 120
  121 DNSEAVGFKG MSVVIDYELA VLCDDGKDKG NADFKIIGAS GFVSNEEVIQ QTERDTTYVP 180
  181 RKCTVNNFYL CRKVDDDNVG CQYSPWSPWG PCVNGRQRRT RKVMRSNQNN EELCLWNGKR 240
  241 IPRSIMEQTR PCGGPSGAPA RGERDKGGRS IGAA

Type	Start	End	Confidence
Signal Peptide	1	21	0.96
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	274	0.99