YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56806619, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQLDKFTYF TQFFWSCLFL FTFYIPICND GDGVLGISRI LKLRNQLVSH RENKIRSNDP  60
   61 NCLEDILRKG FSTGVSYMYS SLFEVSQWCN AVDFLGKRRK MTLISCFGEI SGSRGMERNI 120
  121 LYLISKSVHS NPGWVITCRN DIMLIHVPHG QGSIGF

Type	Start	End	Confidence
Cytoplasmic	1	7	0.42
Transmembrane Helix	8	28	0.65
Non-Cytoplasmic	29	156	0.59