YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49617824
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.40
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIVCHQVPV LAGSATLATM GTLILCLGKP ASYGKHTESV SSGVPFLPAR IAWFLQELPS  60
   61 FVVSVGMLAW QPRSLFGPPG NVLLALFSAH YFH

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.40
Transmembrane Helix	8	28	0.70
Cytoplasmic	29	48	0.39
Transmembrane Helix	49	70	0.59
Non-Cytoplasmic	71	93	0.45