YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60547609
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.36
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALNIVSKIL KTYRSLHLNR FCWRFVCGHE GPCLNLYATT ILLNVFNSCP SIIISKNRIM  60
   61 CSQDIYYLHR SDPKPLLYVV KQTPSSYKSI AARTRAAVLL RVVLLKTRSL AMVHLSTLHS 120
  121 LMTVTILSSI DSFMEDPSSN RDLTCVKSPS SICLKALMEP LSISTIYLFV ALGNVLLVYV 180
  181 LNSESFDLSF LCIWFFLD

Type	Start	End	Confidence
Cytoplasmic	1	109	0.81
Transmembrane Helix	110	130	0.48
Non-Cytoplasmic	131	160	0.51
Transmembrane Helix	161	183	0.75
Cytoplasmic	184	198	0.36