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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56605384, gi|...
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAYALLNDS TPRGVNGGFD DSPLTSASTN SNGSDELNHQ QIVQVPQPRL PVGKMVRKRI  60
   61 ASEMEIEGLD SGGGGGGGGS RRYYCCSSTV LPRSLASDRP LEKIRRIGII VLLQTLAMAA 120
  121 TTPLLCINLT ALTSVVIEGS NLSNPPSGSD ATVSSTTSNN NLLDSTLPVL RPQPHHHHLQ 180
  181 NPAVCGFSGL PLFPPESNHH HNKLNTRNNP FPLPNPSQVL LHNPPTTATT SIIAAASSPM 240
  241 DDSSATAWID GIIKDLIHSS TAISIPQLIQ NVREIIYPCN PNLANLLEFR LRTLTDPSVP 300
  301 NFATEDHRVR KSPLPLPAPV AGLGLQQRQF NQEQHEQEHD CSGLKLNLDS TSLHNLSNFP 360
  361 SQPPFHEPYL QWGATPPPVP TPSAAAAGED ALQRLPGHHQ LNISSVTPSS LVSLNHVPSK 420
  421 PQSEQQNSCT KAAAAAQPAP APPSTSNNPS ATALLIREIK EEMRQQKRDE EGLHLLTLLL 480
  481 QCAEAVSADN LEEANKMLLE ISELSTPFGT SAQRVAAYFS EAMSARLVSS CLGIYAALPP 540
  541 SLVPHTHSQK IASAFQIFNG ISPFVKFSHF TANQAIQEAF EREERVHIID LDIMQGLQWP 600
  601 GLFHILASRP GGPPYVRLTG LGTSQEVLEA TGKRLTEFAE KLGLPFDFFP VADKIGNLDL 660
  661 ERLNVSKREA VAVHWMQHSL YEVTGSDSNT LWLLQRLAPK VVTVVEQDLS HTGSFLGRFV 720
  721 EAIHYYSALF DSLGVSYGEE SEERHLVEQQ LLSREIRNVL AVGGPSRSGE VKFQNWREKL 780
  781 QQSGFKGISL AGNAATQATL LLGMFPSDGY TLVEDNGTLK LGWKDLCLLT ASAWKPPFHH 840
  841 HAAAAAAAAV TNNHIPRY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle