YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60657596
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSVERSKRR VQLWKKAIVH FGLCFVMGFF TGFAPAGKAS IFTSHVAASN KSQSLPQPVE  60
   61 MLHQQAASAP HASNVNRSLI AETAVPAPPS SKESDHATFL EKEETESKLA PRRLAIIVTP 120
  121 TSTKDPYQGV FLRRLANTIR LVPPPLLWIV VEGQSDSDEV SEVLRKTGIM YRHLVFKENF 180
  181 TDPEAELDHQ RNVALRHIEK HRLSGIVHFA GLSNVYDLGF FDEIRQIEVF GTWPMALLSA 240
  241 NEKKVIIEGP VCDSSQVIGW HLRKMNNETD KRPPIHISSF GFNSSILWDP ERWGRPSSVQ 300
  301 QTSQNSIKFV KQVALEDETK LKGIPPEDCS KIMLWRLNLP TSKSPSYQEN QEDKIV

Type	Start	End	Confidence
Cytoplasmic	1	16	0.90
Transmembrane Helix	17	37	0.87
Non-Cytoplasmic	38	356	0.99