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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60657592
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGPPGSVEA RHRLSASFED LYKRRLTRSK VKGVEKPFNI PIQDRSSCCK FPLIKFILVV  60
   61 IIAGTIVSLL YSPDVDQLSH SGSRQNFVNR WIWGGSDPRY VSDLDVKWDD VMKVIEKLGE 120
  121 QNDYQGIGLL NFNDSEVYNW NQLTPDATHV NIQLDYADKN MTWDSLYPEW IDEEQEKEVP 180
  181 VCPSLPKPDT PRKRLDLIAV KLPCRNEWNW SRDVARLHLQ LAAASLAASA KGFYPVHMLF 240
  241 ITRRFPIPNL FSCKELVVRE GNVWLYKPDV NVLRQKLHLP VGSCELALPL RDRARAYSGN 300
  301 PQREAYATIL HSAHVYVCGA IAAAQSIRLS GSNRDLVILV DETISVYHRS GLEAAGWKIR 360
  361 TIQRIRNPKA EKDAYNEWNY SKFRLWQLTD YDKIIFIDAD LLILRNIDFL FGMPEISATG 420
  421 NNASLFNSGV MVIEPSNCTF NLLMEHINEI ESYNGGDQGY LNEVFTWWHR IPKHMNFLKH 480
  481 FWIGDEEEVK QKKTRLFAAE PPILYVLHYL GVKPWLCFRD YDCNWNADIF QEFASDVAHE 540
  541 KWWRVHDAMP EQLHQFCSLK SKQKAQLEFD RREAEKANYT DGHWKIKVQD RRLKKCVDNV 600
  601 CNWKSMLKHW GETNWTNDEF FNPSPPAIST ASLPGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle