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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60688087
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RMHGLFVASH PWEVIVGTVT LTICMMSMNM FTGNNKICGW NYECPKFEED VLSSDIIILT  60
   61 ITRCIAILYI YFQFQNLRQL GSKYILGIAG LFTIFSSFVF STVVIHFLDK ELTGLNEALP 120
  121 FFLLLIDLSR ASALAKFALS SNSQDEVREN IARGMAILGP TFTLDALVEC LVIGVGTMSG 180
  181 VRQLEIMCCF GCMSVLANYF VFMTFFPACV SLVLELSRES REGRPIWQLS HFARVLEEEE 240
  241 NKPNPVTQRV KMIMSLGLVL VHAHSRWIAD PSPQNSTAEQ AKVSLGLDED VSKRIEPSVS 300
  301 LWQFYLSKMI SMDIEQVITL SLAFLLAVKY IFFEQAETES TLSLKNPITS PVVTSKKAQD 360
  361 NCCRREPLLV RRNQKLSSVE EDPGANQERK VEVIKPLVVE AETTSRATFV LGASVASPPS 420
  421 ALGTQEPGIE LPIEPRPNEE CLQILENAEK GAKFLSDAEI IQLVNAKHIP AYKLETLMET 480
  481 HERGVSIRRQ LLSTKLAEPS SLQYLPYRDY NYSLVMGACC ENVIGYMPIP VGVAGPLCLD 540
  541 GKEYQVPMAT TEGCLVASTN RGCRAISLGG GASSRVLADG MTRGPVVRLP RACDSAEVKT 600
  601 WLETPEGFAV IKEAFDSTSR FARLQKLHVT MAGRNLYIRF QSRTGDAMGM NMISKGTEKA 660
  661 LLKLQEFFPD MQILAVSGNY CTDKKPAAIN WIEGRGKTVV CEAVIPAKVV REVLKTTTEA 720
  721 MVDVNINKNL VGSAMAGSIG GYNAHAANIV TAIYIACGQD AAQNVGSSNC ITLMEASGPT 780
  781 NEDLYISCTM PSIEIGTVGG GTNLLPQQAC LQMLGVQGAC KDNPGENARQ LARIVCGTVM 840
  841 AGELSLMAAL AAGHLVRSHM VHNRSKINLQ DLQGTCTKKA A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle