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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|82917251, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRHLTLLLL LLLFLQQFGD SDGSQRLEPT PPIQFTHFQY NVTVHENSAA KTYVGHPRKM  60
   61 GIYILDPSWE IRYKIVSGDS ENLFKAEEYV LGDFCFLRIR TKGGNTAILN REVRDHYTLI 120
  121 VKAVEKATDA EARAKVRVQV LDTNDLRPLF SPTSYSVSLP ENTAIRTSIA RVSATDADIG 180
  181 TNGEFYYSFK DRTDVFAIHP TSGVVVLTGR LDFLETQLYE LEILAADRGM KLYGSSGVSS 240
  241 LAKLTVHVEQ ANECAPIITA VTLSPSELDK DPTYAIITVE DCDQGANGEI ASLSIVAGDL 300
  301 LQQFKTVRSF PGSKAFKVKA VGAVDWDSHP YGYNLTLQAK DKGTPPQFSP VKVVHIISPQ 360
  361 FRAGPVKFEM DVYRAEISEF APPHTPVVLV KAIPSYSHLR YVFKSAPGKP KFGLNHNTGL 420
  421 ISILEPIRRQ HTSHFELEVT TSDKRASARV VVKVLGTNSN PPEFTQTSYK ASIDENAPIG 480
  481 AAVTRVSAMD PDEGENGYVT YSIANLNHVP FVIDHFTGTV STSENLDYEL MPRVYTLRIR 540
  541 ASDWGLPYRR EVEVLATITL NNLNDNTPLF ERINCEGTIP RDLGVGEQIT TVSAIDADEL 600
  601 QLVRYQIEAG NELDLFGLNP SSGVLSLKHS LTDGLGAKVS FHSLRITATD GENFATPLYI 660
  661 NLTVAASRKP VNLQCEETGV AKMLAEKLLQ ANKLHSQGDV EDIFFDSYSV NTHTPQFGVT 720
  721 LPTGIEVKEN LPVGANILFM NATDLDSGFN GKLVYAISGG NDDSCFTIDM ETGVLKVLSP 780
  781 LDREVMDKYT LNITVYDLGI PQRAAWRLLD VTVLDANDNA PEFLQESYFV EVSEDKEVNS 840
  841 EIIQVEATDK DLGPSGHVTY AILTDTEKFS IDSMTGVVKI IQPLDREVQP VHYLKIEARD 900
  901 QATEEPRLFS TVLLKVSLDD VNDNPPRFIP PNYSVKVRED LPEGTIIMWL EAYDPDVGQS 960
  961 SQVRYSLLDH GEGHFDVDKL SGAVRIVQQL DFEKKQLYNL TVRAKDKGKP VSLSSTCYVE1020
 1021 VEVVDVNENL HTPVFSSFVE KGVVKEDVPT GSSVMTVSAH DEDTGRDGEI RYSIRDGSGI1080
 1081 GVFRIDEETG VIETSDRLDR ESTSHYWLTV YATDQGVVPL SSFIEVYIEV EDVNDNAPQT1140
 1141 SEPVYYPEIM ENSPKDVSVV QIEAFDPDSS SNDKLTYRIT SGNPQGFFSI HPKTGLITTT1200
 1201 SRKLDREQQD EHILEVTVTD NGVPPRSTIA RVIVKILDEN DNRPQFLQKF YKIRLPEREK1260
 1261 ADGDRSASKR EPLYRVIAAD KDEGPNAELS YSIEEGNEHG RFSIEPKTGV VSSKKFSAAG1320
 1321 EYDILSIKAV DNGRPQKSST TRLHIEWISK PKPSSEPISF EESVFSFTVM ESDPVAHMIG1380
 1381 VISVEPPGMP LWFDIIGGNY DSHFDVDKGT GTIIVAKPLD AEQKSSYNLT VEATDGTTTI1440
 1441 LTQVLIKVID TNDHRPQFST SKYEVAVPED TEPEVEILQI SAVDRDEKNK LIYTLQSSID1500
 1501 PASLKKFRLD PATGALYTAE KLDHEAIHQH VLTVMVRDQD VPVKRNFARI VVNVSDKNDH1560
 1561 APWFTSPSYD GRVYESAAVG SVVLQVTALD KDKGRNAEVL YSIESGNIGN SFTIDPILGS1620
 1621 IKTARELDRS HQVDYDLMVK ATDKGDPPMS EMTSVRIAVT VADNASPKFT SKEYSAEISE1680
 1681 AIRIGSFVGM VSAHSQSSVM YEIRDGNMGD AFNINPHSGS IITQRALDFE TLPMYSLTVQ1740
 1741 GTNMAGLSTN TTVVVHVRDE NDNPPVFTQA EYSGFISESA SVNSVVLTDR NVPLVIRATD1800
 1801 ADRESNALLV YQIVEPSVHN YFAIDPTTGA IRTVLSLDYE ETHAFHFTVQ VHDMGTPRLF1860
 1861 AEYAANVTVH VIDINDCPPV FSKSLYEVSL LLPTYRGVNV ITVNATDADS KAFSQVMYSI1920
 1921 TEGNIGEKFS MDHKTGTIAI QNTTQLRSRY ELTVRASDGR FTSMASVKIN VKESRESPLK1980
 1981 FTQDAYSAVV KENSTEARTL AVITAIGNPL NEPLFYRILN PDRRFKISHT SGVLSTTGIP2040
 2041 FDREQQETFD VVVEVTKEHE PSAVAHVVVK VTVEDQNDNA PVFVNLPYYA VVKVDAEVGH2100
 2101 VIRYVTAIDR DSGRNGDIHY YLKEHHDHFQ IGPSGDISLK KQFEHDTLNK EYLVTVVAKD2160
 2161 GGSPAFSAEV LVPITVMNKA MPVFEKAFYS AEIPENIQMH SPVVHIQANS PEGLKVFYSI2220
 2221 TDGDPFSQFT INFNTGVVNV IAPLDFESHP AYKLSVRATD SLTGAHAEVF VDIIVEDIND2280
 2281 NPPVFVQPSY STTLSEASVI GTPVLQVRAT DSDSEPNRGI SYQLIGNHSK SHDHFHIDSN2340
 2341 TGLISLVRAL DYEQSQQHRI FVRAVDGGMP ALSSDVVVTV AVTDLNDNPP LFEQQVYEAR2400
 2401 ISEHAAHGHF VMCVRACDAD SSDLDKLEYS ILSGNDHKSF IIDRETGIIT LSNLRRHTLK2460
 2461 PFYSLNVSVS DGVFRSSARV NVTVMGGNLH SPVFHQNEYE VELAENAPLH TLVVQVKASD2520
 2521 RDSGIYSHVT YHIVNDFAKD RFYVNDRGQI FTLEKLDRET PAEKVISIRL MAKDAGGKVA2580
 2581 FCTVNVILTD DNDNAPQFRS TKYEVNIGSS AAKGTSVVKV FASDADEGSN ADVTYAIEAD2640
 2641 SESVKENLEI NKLTGLITTK ESLIGLENEF FTFFVRAVDS GSPPRESVVP VYIKILPPEV2700
 2701 QLPRFSEPFY TYTISEDTPI GTEIDLIRVE HGGAVLYILV KGNTPESNRD EFFVIDRQNG2760
 2761 RLKLEKSLDH ETTKWYQFSI LARCTLDDYE VVASIDVSIQ VKDANDNSPV LESSPYEAFI2820
 2821 VENLPGGSRV IQIRASDLDS GANGQVMYSL DQSQDADIIE SFAINMETGW ITTLKELDHE2880
 2881 ERASYQIKVV ASDHGEKVQL SSTAIVGVTV TDVNDSPPRF TAEIYKGTVS EDDPPGGVIA2940
 2941 ILSTTDADTE EINRQVSYFI TGGDALGQFA VENVQSDWRV YVKKPLDREQ KDSYLLTVTA3000
 3001 TDGTFSSKAR VEVKVLDAND NSPVCEKTSY SDTIPEDALP GKLVMQVSAT DADIRSNAEI3060
 3061 TYTLFGSGAE KFKLNPDTGE LRTLALLDRE EQAVYNLLVK ATDGGGRSCQ AAIVLTLEDV3120
 3121 NDNAPEFTAE PYTITVFENT EPGTPLTRVQ ATDADTGLNR KISYSLVESA DGQFSINERS3180
 3181 GIIQLEKHLD RELQAVYTLT LKAVDQGLPR RLTATGTVVV SVLDINDNPP VFEYREYGAS3240
 3241 VSEDIVIGTE VLQVYAASRD IEANAEITYA IISGNEHGKF SIDSKTGAIF IIESLDYESS3300
 3301 HEYYLTVEAT DGGTPSLSDV ATVNINVTDI NDNSPVFSQD TYTTVVSEDA ALEQPVITIM3360
 3361 ADDADGPSNS HIHYSIIEGN QGSPFTIDPV RGEVKVTKPL DRETISGYTL TVQAADNGNP3420
 3421 PRVNTTTVNI DVSDVNDNAP LFSRDNYSVI IQENKPVGFS VLKLVVTDKD SSHNGPPFFF3480
 3481 TIVSGNDENA FEVNQHGVLL TAATIKRKVK DHYLLHVKVA DSGKPQLSSM THIDIRVIEE3540
 3541 SIHPPAILPL EIFITAFGEE YSGGVIGKIH ATDQDVYDTL MYSLDPHMDG LFSVSSTGGK3600
 3601 LIAHRKLDIG QYLLNVSVTD GKFTTVADIT VHIQQVTQEM LNHTVAIRFA NLTPEEFVGD3660
 3661 YWRNFQRALR NILGVRKNDI QIVSLQPSEP HSHLDVLLFV ERSGGTHVST KQLLHKINSS3720
 3721 VTDVEEIIGV RILEVFQKLC AGLDCPWKFC DEKVSVDENV MSTHSTARLS FVTPRHHRTA3780
 3781 VCLCKDGTCP PVHHGCEDNP CPAGSECVAD PREEKYSCVC PGGGFGKCPG SSSITFTGNS3840
 3841 FVKYRLLENE NRLEMKLSMR LRTYSSHAVV MYARGTDYSI LEIHTGRLQY KFDCGSGPGI3900
 3901 VSVQSIQVND GQWHAVSLEV EGNYAKLVLD EVHTASGTAP GALKTLNLDN YVFFGGHLRQ3960
 3961 QGTKHGRGAQ VASGFRGCMD SIYLNGQELP LNNKPRAYAH IEEWVDLSHG CLLTATEDCS4020
 4021 SSPCQNGGVC NPSPTGGYYC KCSALYVGTF CEVSVNPCSS NPCLYGGTCM VDNGGFVCQC4080
 4081 RGLYTGQRCQ LSPYCKDDPC KNGGTCFDSL DGAVCQCDSG FRGERCQSDI DECAGNPCRN4140
 4141 GALCENTHGS YHCNCSQEYR GKHCEDASPN HYVSTPWNIG LAEGIGIIVF IAGIVLLVMV4200
 4201 FVLCRKMISR KKKRQAEPED KRLGPTTAFL QRPYFDSKLN KNIYSDIPPQ VPVRPISYTP4260
 4261 SIPSDSRNNL DRNSFEGSAI PEHPEFSTFN PESMHGHRKA VAVCSVAPNL PPPPPSNSPS4320
 4321 DSDSIQKPSW DFDYDAKVVD LDPCLSKKPL EEKPSQPYSA RESLSEVQSL SSFQSESCDD4380
 4381 NGYHWDTSDW MPSVPLPDIQ EFPNYEAIDE HTPLYSADPN AIDTDYYPGG YDIESDFPPP4440
 4441 PEDFPAPDEL PPLPPEFSDQ FESIHPPRDM PAAGSLGSSS RSRQRFNLNQ YLPNFYPADM4500
 4501 SEPQKQGAGE NSPCREPYTP YPPGYQRNFE APTIENMPMS VYASTASCSD VSACCEVESE4560
 4561 VMMSDYESGD DGHFEEVTIP PLDSQQHTEV 

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