YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60677965
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYASSIFASL TLVFAGWYFV IIIKTYPLYY IHLLPLDLTE SIYHTYAHSW ILGTFYDTYI  60
   61 IYMIYMFLPI HFISGAVLLA LLVSGLYILY FVIFIAQGFA QFASALFSVG GMSVDIVHYL 120
  121 CLNLVGIFYR VMNDTVVRSS FLDRHQYIKE KIWLRNARLQ EKQLLDSILP PQISLPLQKD 180
  181 IQGRIVMAKQ GIHSWTAMER TMAIQIHPDV SILYADVVNY THLTTTLTVE MLVKVLHDLY 240
  241 GRFDLAAYRY KVQRIKFLGD CYYCVAGLSD PDPDHANNCV ILGLSMINHI MEVR

Type	Start	End	Confidence
Cytoplasmic	1	6	0.87
Transmembrane Helix	7	28	0.88
Non-Cytoplasmic	29	45	0.81
Transmembrane Helix	46	68	0.75
Cytoplasmic	69	71	0.59
Transmembrane Helix	72	96	0.82
Non-Cytoplasmic	97	101	0.55
Transmembrane Helix	102	129	0.67
Cytoplasmic	130	294	0.85