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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60677707
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSKYVLATL LALFAQSMCI QELSLPPEGS HSTAATRSKK AKNAISEDIM YNYLMQFDYL  60
   61 PKSDLETGAL RTEDQLKEAI RSLQSFGNIT VTGEIDSATA RLIQKPRCGV GDRRSADSFS 120
  121 PDNLYHEIGS NVRVRRFALQ GPKWSRTDLT WSMVNRSMPD ASKVERMVQT ALDVWANHSK 180
  181 LTFREVYSDQ ADIQILFARR AHGDGYKFDG PGQVLAHAFY PGEGRGGDAH FDADETWNFD 240
  241 GESDDSHGTN FLNVALHELG HSLGLAHSAI PDAVMFPWYQ NNEVAGNLPD DDRYGIQQLY 300
  301 GTKEKTWGPY KPQTTTTTTT TTTMRAMIYR ADKPAYWPWN NPSNNPNNDR NRARERQEEE 360
  361 RRRQEKERRR QEEERRHQEE ERRRQVEERQ RQEEERWRQE QERQEEENRR REIEHKSQWE 420
  421 RNPSKERNRP RERQEMERRR QEQERQEQER QEQEDRRRER ERDRQLEWER RNRNGAREPV 480
  481 TPTANTTPRP TNKPYPTVHR QHHHHNKPRK PKPDSCMTYY DAISIIRGEL FIFRGPYLWR 540
  541 IGTSGLYNGY PTEIRRHWSA LPENLTKVDA VYENKQRQIV FFIGREYYVF NSVMLAPGFP 600
  601 KPLASLGLPP TLTHIDASFV WGHNNRTYMT SGTLYWRIDD YTGQVELDYP RDMSIWSGVG 660
  661 YNIDAAFQYL DGKTYFFKNL GYWEFNDDRM KVAHARAKLS ARRWMQCARS ANEVDDEQRW 720
  721 TASLVSEGEE TGRSGSRELR INHFILSILL LAIANWRS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle