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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60677701
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPYYIQDVN APLPYAFEYV GWPVAMWIVT VGGLVGLLAS LFGALFPLPR VMYSMAQDGL  60
   61 LFKFLGKVSP RFRVPVTGSI VAALFTAAIA GLFDLSQLVS LLSIGTLLAY SVVAISIMLL 120
  121 RYMDYCEVDE NPGQREVRAS ETTSLTSSSE RFTFGSVCTQ LFNVHRVQEP NAISSRIVGV 180
  181 LSTLFCLISL GIGVLIMQAH LLIASKEVWA LTLLIVLVVL MLLVICLICL QPREARRRLF 240
  241 RVPFVPIVPA ISIFINIYLM LQLDTWTWIR FGVWMIVGIP VFLACWYLYD CKNPAKRNPE 300
  301 RWDFYKALKG LQESREQEYH CISKESVLTL ETQLKKSPSS SLNRIHNLSD VGDDLVEIKN 360
  361 ANGKVFYVED NKSENSTATL GSNPESPSRE DEQSVIAMLD DVLNAQDTQQ GQQDLDLQQQ 420
  421 MIFERHFSLD SEMYPSVIET VIVATVHSSS DDDEVQSGIT LKLSRYDECK LVAHQMLEEM 480
  481 FNSEAFYEQL QKVKAKEVPL VKGDKLEGEA ESVNDDEAAK PVFLFQRLGS QTSIISQAST 540
  541 IEDPLHSTKF KDRLSHIIMN ANAHQVKVVA KRSEDVDGEV ELEPVPDEEP KTRPLLKQSK 600
  601 SETDVRRLML KAISELKIDR NETGNADEVP AEVSTTTGNP SKDPVPGAGP IAAPVAAAGG 660
  661 SNIPRPPKFD PVLYKTINSI SLRKQRPSLN RQHVVDAKNP ALLRPESQTE TRPDPGEQPE 720
  721 PEPLPFKAKL EAILQRGPSH RTQQHPDLVR RQRPQSTYIE MEEVES

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle