YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ZNT2_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTMDKQNLL ESTRGARSFL GSLWKSEASR IPPVDLPAVE LAVQSNHYCH AQKDSGSHPD  60
   61 PEKQRARRKL YVASAICLVF MIGEIIGGYL AQSLAIMTDA AHLLTDFASM LISLFALWVS 120
  121 SRPATKTMNF GWHRAEILGA LLSVLSIWVV TGVLVYLAVQ RLISGDYEIK GDTMLITSGC 180
  181 AVAVNLIMGL ALHQSGHGHS HGNSRDDSSQ QQNPSVRAAF IHVIGDLLQS VGVLVAAYII 240
  241 YFKPEYKYVD PICTFLFSIL VLGTTLTILR DVILVLMEGT PKGVDFTTVK NLLLSVDGVE 300
  301 ALHSLHIWAL TVAQPVLSVH IAIAQNADAQ AVLKVARDRL QGKFNFHTMT IQIEKYSEDM 360
  361 KNCQACQGPL E

Type	Start	End	Confidence
Cytoplasmic	1	69	0.99
Transmembrane Helix	70	91	0.93
Non-Cytoplasmic	92	99	0.78
Transmembrane Helix	100	120	0.88
Cytoplasmic	121	136	0.85
Transmembrane Helix	137	159	0.91
Non-Cytoplasmic	160	173	0.84
Transmembrane Helix	174	195	0.86
Cytoplasmic	196	217	0.84
Transmembrane Helix	218	241	0.89
Non-Cytoplasmic	242	247	0.78
Transmembrane Helix	248	269	0.85
Cytoplasmic	270	371	0.82