YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|48525531
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATARLLARV SRQCAGAVAA SSAAGRHRGP LAAASVEQFA GSCLSARVPH NHFRYSTSIF  60
   61 QKIGFSSVSP QQSDNEVNEL KDQERALDGS SEDCSSGSIE GLDLSKDDLV KLVREKDELL 120
  121 KSKDDEIKDM KDKVLRSYAE MENIIARTKR ESENSKKYAV QNFSKSLLDV ADNLARASSV 180
  181 VKESFSKIDA SKDSAGAIPL LKTLLEGVDM TEKQLAEVFK KFGVEKFDPL NEKFDPNRHC 240
  241 AVFQIPDPSK PPGTVASVVK VGYMLHDRVL RPAEVGVTEG GADATEEAEQ PEEKTSRD

Type	Start	End	Confidence
Signal Peptide	1	34	0.90
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	298	0.99