YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77736049, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKLRRVLSG QDDEEQGLTA QVLDASTLSF NTRLKWFAIC FVSGIFFSIL GTGLLWLPGG  60
   61 IKLFAVFYTF GNIAALASTC FLMGPVKQLK KMFETTRLLA TVIMLLCFVL TLCAALWWHK 120
  121 KGLAVLFCIL QFLSMTWYSL SYIPYARDAV IKCCSSLLS

Type	Start	End	Confidence
Cytoplasmic	1	35	0.98
Transmembrane Helix	36	57	0.94
Non-Cytoplasmic	58	63	0.85
Transmembrane Helix	64	86	0.91
Cytoplasmic	87	97	0.85
Transmembrane Helix	98	118	0.95
Non-Cytoplasmic	119	122	0.86
Transmembrane Helix	123	142	0.91
Cytoplasmic	143	159	0.88