YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83816943, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGNSGCPFF LWGLLAFLGL ALVISLIFNV SHYVEKQRRD KMYRYSDDYI PRAEEYYEDA  60
   61 PIYGNLENII PEPLDEDCYE QMKARPQRSA SDAQEVVAPA QVPAEAQICY ASLDHSMKGK 120
  121 RRRPRKQNTN LSDRGKDAQD CTMGANVSQN NMVESFPPDN QVVEESIHDD PARLFGLIRA 180
  181 KREPVI

Type	Start	End	Confidence
Non-Cytoplasmic	1	8	0.74
Transmembrane Helix	9	33	0.82
Cytoplasmic	34	186	0.77