YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AT5F1_BOVIN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRVVLSAA AAAAPSLKNA ALLGPGVLQA TRIFHTGQPS LAPVPPLPEH GGKVRFGLIP  60
   61 EEFFQFLYPK TGVTGPYVLG TGLILYLLSK EIYVITPETF SAISTIGFLV YIVKKYGASV 120
  121 GEFADKLNEQ KIAQLEEVKQ ASIKQIQDAI DMEKSQQALV QKRHYLFDVQ RNNIAMALEV 180
  181 TYRERLHRVY REVKNRLDYH ISVQNMMRQK EQEHMINWVE KRVVQSISAQ QEKETIAKCI 240
  241 ADLKLLSKKA QAQPVM

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	256	0.99