YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PTH2_BOVIN
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISRSLVMEY LTNPGALSLA AGVACGVCLG WGLRMRFGML PKSSVRETNP DTETEASILG  60
   61 ESGEYKMILV VRNDLKMGKG KVAAQCSHAA VSAYKQIQRR NPELLKEWEY CGQPKVVVKA 120
  121 PDEETLVELL THAKVLGLTV SLIQDAGRTQ IAPGSRTVLG IGPGPADLID KVTGHLKLY

Type	Start	End	Confidence
Non-Cytoplasmic	1	14	0.62
Transmembrane Helix	15	33	0.88
Cytoplasmic	34	179	0.66