YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62531327
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FCRRYQDQLE AEIEETYANF IKHNDGKNIF YAARTPATLF AVMFAMYIIS GLTGFIGLNS  60
   61 IAVLCNLVMG LALTSLCTWA YVKYSGEFRE IGTMIDQVAE TLWEQVLKPL GDNLMEENIR 120
  121 QSVTNSIKAG LTDQVSHHAR LKTD

Type	Start	End	Confidence
Cytoplasmic	1	29	0.96
Transmembrane Helix	30	51	0.83
Non-Cytoplasmic	52	59	0.56
Transmembrane Helix	60	82	0.89
Cytoplasmic	83	144	0.96