YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56754168
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLFESYEKQ YGNLTSDITF KLGKIPQLNG SERTKEVRDV SALFDETRDL IDQMSLEVQE  60
   61 MRHDIRPKFQ NRLECYRKEL EKLTTEFKRP RYAARRPENR NLGISDDEDT LHEEVLFDTD 120
  121 MRAQLLSNTE RISRTTTKLE DGVRIALETE EVGGHILQDL SEQREKLQRS RDRLRQADSD 180
  181 LKKSSRVLSV MTRRILQNKL LLIAVIFIMV LIFLLTIYLV TRHPTTHPNL SSATINSSHP 240
  241

Type	Start	End	Confidence
Cytoplasmic	1	199	0.91
Transmembrane Helix	200	221	0.94
Non-Cytoplasmic	222	240	0.90