YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56268919, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPASSPGNMG GSVREPALSV TLWLSWGAVL GAVTCAVALL IQQAELQSLR REVSRLQRSG  60
   61 GASQKRGEPP WQSLWEQSPD VLGAWKDGAK SRRRRAVLTQ KHKKKQSVLH LVPINITSKD 120
  121 SDMTEVMWQP ALRRGRGLEA QGDTVRVRDT GIYLLYSQVL FHDVTFTMGQ VVSREGQGRR 180
  181 ETLFRCIKSM PSDPDRAYNS CYSAGVFHLH QGDIITVKIP RANAKLSLSP HGTFLGFVKL 240
  241

Type	Start	End	Confidence
Cytoplasmic	1	19	0.77
Transmembrane Helix	20	41	0.89
Non-Cytoplasmic	42	240	0.86