YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56789902
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVLRQLRLL LWKNYTLKKR KVLVTVLELF LPLLFSGILI WLRLKIQSEN VPNATVYPDQ  60
   61 HIQELPLFFS FPPPGGSWEL AYVPSHSDAA RTITEAVRRE FMIKMRVHGF SSEKDFEDYV 120
  121 RYDNHSSNVL AAVVFEHTFN HSKDPLPLAV RL

Type	Start	End	Confidence
Cytoplasmic	1	20	0.93
Transmembrane Helix	21	42	0.91
Non-Cytoplasmic	43	152	0.97