YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56971852
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGYCANNSTC TVNQGNQPQC RCLPGFLGDR CQYRQCSGFC ENFGTCQMAA DGSRQCRCTV  60
   61 YFEGTRCEVN KCSRCLQGAC VVNKQTGDVT CNCTDGRVAP SCLTCIDHCS NGGSCTMNSK 120
  121 MMPECQCPPH MTGPRCEEQV VSQQQPGHMT SILIPLLLLL LLLLVAGVVF WYKRRVRGAK 180
  181 GFQHQRMTNG AMNVEIGNPT YKMYEGGEPD DVGGLLDADF ALDPDKPTNF TNPVYATLYM 240
  241 GGHGSRHSLA STDEKRELLG RGPEDEIGDP LA

Type	Start	End	Confidence
Non-Cytoplasmic	1	151	0.96
Transmembrane Helix	152	172	0.96
Cytoplasmic	173	272	0.97