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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: HPT_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRALGAVVTL LLWGQLFAVE LGNDATDIED DSCPKPPEIA NGYVEHLVRY RCRQFYKLQT  60
   61 EGDGIYTLNS EKQWVNPAAG DKLPKCEAVC GKPKHPVDQV QRIIGGSMDA KGSFPWQAKM 120
  121 ISRHGLTTGA TLISDQWLLT TAQNLFLNHS ENATAKDIAP TLTLYVGKNQ LVEIEKVVLH 180
  181 PERSVVDIGL IKLKQKVLVT EKVMPICLPS KDYVAPGRMG YVSGWGRNVN FRFTERLKYV 240
  241 MLPVADQEKC ELHYEKSTVP EKKGAVSPVG VQPILNKHTF CAGLTKYEED TCYGDAGSAF 300
  301 AVHDTEEDTW YAAGILSFDK SCAVAEYGVY VRATDLKDWV QETMAKN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle