YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|59802932
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLPYPARKD SNAARYKPAR PPSASSGYIP PILRRIRLRG GLIIAVVTFA CFYLFFSISR  60
   61 ASTASRSIKR SGAQHPITTH DPTGNPPAVL VTVMDSGLHS NSYLQNLKEN RLTYAKKHGY 120
  121 ETWFPDVFEY DLKGAPTSWS KVVAMRHALT KFPDATYFWF LDHDTIIVNM EPTVEQSLME 180
  181 AKAIGDVMIK DHPVVPPDSI IKTFTHLKGE DVDLVLTQDK AGLSVGSFIV RNGEWAKFFL 240
  241 ETWFDPIYRS YNFQKAEEHA LEHIVQWHPT ILSKLAIVPQ RYINSYNTGD SGESYQAGDM 300
  301 VVRFPACSKV GYPACEAKAA KYEKQWRGTK S

Type	Start	End	Confidence
Cytoplasmic	1	37	0.96
Transmembrane Helix	38	58	0.91
Non-Cytoplasmic	59	331	0.98