YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58014106, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARRLPLWTA LLLPFLLTGV GTAAAASPPH DECPVPTIVE SVLGTRDTCS TLDLGNPVGV  60
   61 VEGDEFTLAT AVNLLHANKD DYIAVLFYAS WCPFSQECKP NFETLASLFP TIRHFAFEES 120
  121 AIRPSIISRY GIHGFPTLFL LNSTMRVRYH GPRTVKPLAA FYTDVSGINA SVNVKSTAGE 180
  181 TMVHPLHDIE RQKDAEQENC PFWWARSPEK ILQQDTYLAL ATAFVILRLL YRLFPKIDSF 240
  241 ARWAWRRHNL FANLMGAHEY FLTYLEQGRQ KFHRLYPSSS KRGNLQEGAM NATAWASKSL 300
  301 ASVSIGEPSA IGRTNSTSEL R

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	321	0.89